BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A03SP1|AL427552
(982 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1803 1922 0.0
>3x_Contig1803
Length = 52241
Score = 1922 bits (969), Expect = 0.0
Identities = 980/983 (99%), Gaps = 1/983 (0%)
Strand = Plus / Minus
Query: 1 gatccattatccgagcagaccaaaccttttgtgattaaggagtaacgcacaacagagtgt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12905 gatccattatccgagaagaccaaaccttttgtgattaaggagtaacgcacaacagagtgt 12846
Query: 61 acagttaacaactaggccaggggatttagtcgcttctccgtgccgtttcaccacttgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12845 acagttaacaactaggccaggggatttagtcgcttctccgtgccgtttcaccacttgata 12786
Query: 121 tgatttgtttgtatttttatctcactagagttaaaaaaaaaaaacagcaaataattttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12785 tgatttgtttgtatttttatctcactagagttaaaaaaaaaaaacagcaaataattttta 12726
Query: 181 ggagttgtgtgcaattctttgtttctgaagcttttggactctttctacaatacacccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12725 ggagttgtgtgcaattctttgtttctgaagcttttggactctttctacaatacacccacc 12666
Query: 241 aaaagttttaatcgattctactttgaaaatcagcgtataagccgagcttgttataggagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12665 aaaagttttaatcgattctactttgaaaatcagcgtataagccgagcttgttataggagg 12606
Query: 301 gctagtatgctgtttcaaagcgtcaggatattatgctcagctacttttaatcttgtcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12605 gctagtatgctgtttcaaagcgtcaggatattatgctcagctacttttaatcttgtcttc 12546
Query: 361 gtatccctgtatgggattttttttgaaaaatacctaaggtcccgcagctagtgaagaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12545 gtatccctgtatgggattttttttgaaaaatacctaaggtcccgcagctagtgaagaaat 12486
Query: 421 cagtagacggaatttaaaaatgtttcactccacttcgaaaatacgtattaaaaatacaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12485 cagtagacggaatttaaaaatgtttcactccacttcgaaaatacgtattaaaaatacaca 12426
Query: 481 tgatgagaaatggcatacatataaatctttttaaaagcgaaaacttactaatctgacaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12425 tgatgagaaatggcatacatataaatctttttaaaagcgaaaacttactaatctgacaga 12366
Query: 541 gtcttggggttcaggtgctaaaaccaatgattcacgcag-gactgaaataggcccgtagt 599
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 12365 gtcttggggttcaggtgctaaaaccaatgattcacgcagtgactgaaataggcccgtagt 12306
Query: 600 ttattattatcagacagtcgacatgttgaactgcttatttgtgtaagatttaaaaaattg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12305 ttattattatcagacagtcgacatgttgaactgcttatttgtgtaagatttaaaaaattg 12246
Query: 660 atagtaaggcatatgtatatatacattaataagttggcttggaaacggaaggggaaagga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12245 atagtaaggcatatgtatatatacattaataagttggcttggaaacggaaggggaaagga 12186
Query: 720 aaagttctacgaccggtttgtatctgtttgccaaacctttacatattacctcaatcattt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12185 aaagttctacgaccggtttgtatctgtttgccaaacctttacatattacctcaatcattt 12126
Query: 780 ttcttttcttcgtctgaaagctggtgatgtactctgcgtgtctccacaactcgaaatggt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12125 ttcttttcttcgtctgaaagctggtgatgtactctgcgtgtctccacaactcgaaatggt 12066
Query: 840 aacgacatctcacatgacgacggtcttctttgattctaatgcatggatacgaattgtcgc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12065 aacgacatctcacatgacgacggtcttctttgattctaatgcatggatacgaattgtcgc 12006
Query: 900 taatcagtacgatgctttattgtagaacttggctatagacttagggatttcatgacactg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12005 taatcagtacgatgctttattgtagaacttggctatagacttagggatttcatgacactg 11946
Query: 960 ttggtaaatattgcyaggcttga 982
|||||||||||||| ||||||||
Sbjct: 11945 ttggtaaatattgctaggcttga 11923
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,302
Number of Sequences: 1807
Number of extensions: 14302
Number of successful extensions: 92
Number of sequences better than 1.0e-20: 1
length of query: 982
length of database: 10,358,551
effective HSP length: 16
effective length of query: 966
effective length of database: 10,329,639
effective search space: 9978431274
effective search space used: 9978431274
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)